Publications

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2021
Peek, R. A., O'Rourke S. M., & Miller M. R. (2021).  Flow modification associated with reduced genetic health of a river‐breeding frog, Rana boylii. Ecosphere. 12(5), 
2020
Young, M., Howe E., O'Rear T., Berridge K., & Moyle P. B. (2020).  Food Web Fuel Differs Across Habitats and Seasons of a Tidal Freshwater Estuary. Estuaries and Coasts. 188,
Yarnell, S. M., Stein E. D., Webb J.A., Grantham T. E., Lusardi R. A., Zimmerman J., et al. (2020).  A functional flows approach to selecting ecologically relevant flow metrics for environmental flow applications. River Research and Applications. 36(2), 318–324.PDF icon Yarnell et al. 2020 RRA (759.84 KB)
2018
Baumsteiger, J., O'Rear T., Cook J., Manfree A., & Moyle P. B. (2018).  Factors affecting distribution and abundance of jellyfish medusae in a temperate estuary: a multi-decadal study. Biological Invasions.
Willmes, M., Hobbs J. A., Sturrock A.M., Bess Z., Lewis L.S., Glessner JG., et al. (2018).  Fishery collapse, recovery, and the cryptic decline of wild salmon on a major California River. Canadian Journal of Fisheries and Aquatic Sciences. PDF icon cjfas-2017-0273.pdf (7.7 MB)
Howard, J. K., Fesenmyer K., Grantham T. E., Viers J. H., Ode P., Moyle P. B., et al. (2018).  A Freshwater Conservation Blueprint for California: Prioritizing Watersheds for Freshwater Biodiversity. Freshwater Science. 37(2), 
2017
Whipple, A., Viers J. H., & Dahlke H. (2017).  Flood regime typology for floodplain ecosystem management as applied to the unregulated Cosumnes River of California, United States. Ecohydrology. 10(e1817), 
Katz, J., Jeffres C., Conrad L., Sommer T., Martinex J., Brumbaugh S., et al. (2017).  Floodplain farm fields provide novel rearing habitat for Chinook salmon. PLoS ONE. 12(6), 
Opperman, J.J., Moyle P. B., Larsen E.W., Florsheim J.L., & Manfree A. D. (2017).  Floodplains: Processes and Management for Ecosystem Services. 258.
2016
Young, M., Perales M., Durand J. R., & Moyle P. B. (2016).  Fish distribution in the cache slough complex of the Sacramento-San Joaquin Delta during a drought. IEP Newsletter.
2015
Moyle, P. B., Quiñones R. M., Katz J. V. E., & Weaver J. (2015).  Fish Species of Special Concern in California. Sacramento: California Department of Fish and Wildlife. https://www.wildlife.ca.gov/Conservation/Fishes/Special-Concern,
Williamson, B. O., O'Rear T., De Carion D., Durand J. R., & Moyle P. B. (2015).  Fishes of the Nurse-Denverton Complex: managed wetlands and tidal waterways in Suisun Marsh. IEP Newsletter.
Yarnell, S. M., Petts G., Schmidt J., Whipple A., Beller E., Dahm C., et al. (2015).  Functional Flows in Modified Riverscapes: Hydrographs, Habitats and Opportunities. BioScience. 65(9), PDF icon BioScience-2015-Yarnell-biosci_biv102.pdf (327.28 KB)
2014
O'Rear, T., & Moyle P. B. (2014).  Fishes and aquatic macroinvertebrates. Suisun Marsh - ecological history and possible futures.
Hui, R., & Lund J. R. (2014).  Flood Storage Allocation Rules for Parallel Reservoirs.. Journal of Water Resources Planning and Management. 141(5), PDF icon Flood Storage Allocation Rules for Parallel Reservoirs.pdf (3.85 MB)
2013
Schaefer, M. M., Doyle L. A., Fleenor W. E., & Johnson M. L. (2013).  Fate and Transport of Three Pharmaceuticals in the Sacramento-San Joaquin Delta. Fate and Transport of Three Pharmaceuticals in the Sacramento-San Joaquin Delta. 11(2), PDF icon SFEW Science Nine 2013 (650.98 KB)
Williams, TH. (2013).  Findings of Upper Klamath Trinity River Chinook salmon Biological Review Team. PDF icon UKTR Chinook Biological Review Team (1.19 MB)
Akhbari, M., & Grigg N. (2013).  A Framework for an Agent-Based Model to Manage Water Resources Conflicts. Water Resources Management. 27(11), 4039-4052.PDF icon Masih Akhbari - Agent Based Modeling.pdf (378.59 KB)
Moyle, P. B., Manfree A. D., & Fiedler P. L. (2013).  The Future of Suisun Marsh as Mitigation Habitat. San Francisco Estuary and Watershed Science. 11(3), 
2012
Moyle, P. B., Hobbs J., & O'Rear T. (2012).  Fishes. Ecology, Conservation, and Restoration of Tidal Marshes: The San Francisco Estuary. 161-173.
Kiernan, J. D., & Moyle P. B. (2012).  Flows, droughts, and aliens: factors affecting the fish assemblage in a Sierra Nevada, California, stream. Ecological Applications. 22(4), pp. 1146-1161.
2011
Gailey, R. (2011).  Factors Affecting Nitrate Concentrations in Water Supply Wells.
Moyle, P. B., & E. G-B. (2011).  Fish. (D., S., & M. R., Ed.).Encyclopedia of invasive introduced species. 229-234.
Null, S. E., & Lund J. R. (2011).  Fish Habitat Optimization to Prioritize River Restoration Decisions. River Research and Applications.
Viers, J. H., & Rheinheimer D. E. (2011).  Freshwater conservation options for a changing climate in California’s Sierra Nevada. Marine and Freshwater Research. 66, 266-278.
2009
Grimaldo, L. F., Sommer T., Van Ark N., Jones G., Holland E., Moyle P. B., et al. (2009).  Factors Affecting Fish Entrainment into Massive Water Diversions in a Tidal Freshwater Estuary: Can Fish Losses be Managed?. North American Journal of Fisheries Management. 29(5), 1253-1270.
Mosepele, K., Moyle P. B., Merron G. S., Purkey D. R., & Mosepele B. (2009).  Fish, Floods, and Ecosystem Engineers: Aquatic Conservation in the Okavango Delta, Botswana. BioScience. 59(1), 53-64.
Null, S. E., Deas M., & Lund J. R. (2009).  Flow and Water Temperature Simulation for Habitat Restoration in the Shasta River, California.
2008
Gonzalez-Diaz, A. A., Quiñones R. M., Velazquez-Martinez J., & Rodiles-Hernandez R. (2008).  Fishes of the La Venta River in Chiapas, Mexico. PDF icon Fishes of the La Venta River, Chiapas, Mexico (25.27 KB)
Grantham, T. E., Christian-Smith J., Kondolf G. Matthias, & Scheuer S. (2008).  A fresh perspective for managing water in California: insights from applying the European Water Framework Directive to the Russian River. Water Resources Center Contribution. 1-101.
Moyle, P. B. (2008).  The Future of Fish in Response to Large-Scale Change in the San Francisco Estuary, California. American Fisheries Society Symposium. 64,
Moyle, P. B., & Bennett W. A. (2008).  The future of the delta ecosystem and its fish. Technical Appendix D to Lund, J., et al., Comparing futures for the Sacramento-San Joaquin delta. 38.
2004
Marchetti, M. P., Light T., Moyle P. B., & Viers J. H. (2004).  Fish Invasions in California Watersheds: Testing Hypotheses Using Landscape Patterns. Ecological Applications. 14(5), 1507-1525.
1998
Moyle, P. B., Marchetti M. P., Baldrige J., & Taylor T. L. (1998).  Fish Health and Diversity: Justifying Flows for a California Stream. Fisheries. 23(7), 6-15.
Moyle, P. B., Marchetti M. P., Baldrige J., & Taylor T. L. (1998).  Fish health and diversity: Justifying flows for a California stream. Fisheries. 23(7), 6-15.PDF icon PutahCRFisheries98.pdf (632.16 KB)
Moyle, P. B., & Smith J. J. (1998).  Freshwater fishes of the Central California Coast. (Chiariello, N., & Dasmann R. F., Ed.).Symposium on biodiversity of the Central California Coast. 17-22.
1996
Moyle, P. B., & Light T. (1996).  Fish Invasions in California: Do Abiotic Factors Determine Success?. Ecology. 77(6), 1666-1670.
Moyle, P. B., & Cech J. J. (1996).  Fishes: An Introduction to Ichthyology. 590.
1995
Moyle, P. B., Yoshiyama R. M., Williams J. E., & Wikramanayake E. D. (1995).  Fish species of special concern in California. 272.
1993
Moyle, P. B. (1993).  Fish: an enthusiast's guide. 272.
1992
Moyle, P. B., & Yoshiyama R. M. (1992).  Fishes, aquatic diversity management areas, and endangered species: a plan to protect California's native aquatic biota. California Policy Seminar.
1991
Moyle, P. B., Kennedy T., Kuda D., Martin L., & Grant G. (1991).  FISHES OF BLY TUNNEL, LASSEN COUNTY, CALIFORNIA. The Great Basin Naturalist. 51(3), 267-270.
1989
Moyle, P. B., Williams J. E., & Wikramanayake E. D. (1989).  Fish species of special concern in California. 222.
1986
Moyle, P. B. (1986).  Fish Introductions into North America: Patterns and Ecological Impact. (Mooney, H. A., & Drake J. A., Ed.).Ecology of Biological Invasions of North America and Hawaii. 58, 27-43.
Moyle, P. B., Li H. W., & Barton B. A. (1986).  The Frankenstein effect: impact of introduced fishes on native fishes in North America. (Stroud, R. H., Ed.).Fish culture in fisheries management. 415–426.
1983
Moyle, P. B., & Baltz D. M. (1983).  Fish populations of Eleanor Reservoir, Yosemite National Park. (Van Riper, C., Whittig L. D., & Murphey M. L., Ed.).Proceedings of the First Biennial Conference on Research in California's National Parks. 183-186.
1982
Moyle, P. B., & Cech J. J. (1982).  Fishes: An Introduction to Ichthyology. 593.
Taylor, T. L., Moyle P. B., & Price DG. (1982).  Fishes of the Clear Lake Basin. (Moyle, P. B., Ed.).Distribution and Ecology of Stream Fishes of the Sacramento-San Joaquin Drainage System, California. Publications in Zoology . 115, 171–224.
Moyle, P. B., & Daniels R. A. (1982).  Fishes of the Pit River System, McCloud River System, and Surprise Valley Region. (Moyle, P. B., Ed.).Distribution and Ecology of Stream Fishes of the Sacramento-San Joaquin Drainage System, California. Publications in Zoology. 115, 1-82.
1980
Grossman, G. D., Coffin R., & Moyle P. B. (1980).  Feeding ecology of the Bay Goby (Pisces: Gobiidae). Effects of behavioral, ontogenetic, and temporal variation on diet. Journal of Experimental Marine Biology and Ecology. 44(1), 47 - 59.