Publications
Homogenization of California's Fish Fauna Through Abiotic Change.
(Lockwood, J. L., & McKinney M. L., Ed.).Biotic Homogenization. 259-278.
(2001). The influence of riparian vegetation on stream fish communities of California.
(Warner, P., & Hendrix H., Ed.).California Riparian Systems. 183-187.
(1982). Life-history patterns and community structure in stream fishes of western North America: Comparisons with eastern North America and Europe.
(Matthew, W. J., & Heins D. C., Ed.).Community and Evolutionary Ecology of North American Stream Fishes. 25-32.
(1987). Loss of Biodiversity in Aquatic Ecosystems: Evidence from Fish Faunas.
(Fiedler, P. L., & Jain S. K., Ed.).Conservation Biology: The Theory and Practice of Nature Conservation, Preservation, and Management. 128-169.
(1992). Management of introduced fishes.
(Kohler, C. C., & Hubert W. A., Ed.).Inland fisheries management in North America. 345-274.
(1999). Management of introduced fishes.
(Kohler, C., & Hubert W., Ed.).Inland fisheries management in North America. 282–307.
(1993). Management of riparian areas in the Sierra Nevada.
Sierra Nevada Ecosystem Project: Final Report to Congress Vol. III, assessments, commissioned reports, and background information. 3, 1-37.
(1996). Marine and freshwater fishery resources.
(Miller, G. T., Ed.).Resource Conservation and Management. 303-339.
(1990). Native Fishes of the Sacramento-San Joaquin Drainage, California: A History of Decline.
(Rinne, J. N., Hughes R. M., & Calamusso B., Ed.).Historical Changes in Large River Fish Assemblages of the Americas. 45, 75-98.
(2005). Native fishes of the San Joaquin drainage: status of a remnant fauna and its habitats.
(Williams, D. L., Byrne S., & Rado T. A., Ed.).Endangered and sensitive species of the San Joaquin Valley, California: their biology, management and conservation. 89–98.
(1992). Potential aquatic diversity management areas.
Sierra Nevada Ecosystem Project: Final report to Congress Vol. II, assessments, commissioned reports, and background information. 2, 1493-1503.
(1996). Potential aquatic diversity management areas in the Sierra Nevada.
Sierra Nevada Ecosystem Project: Final report to Congress , Vol. III, assessments, commissioned reports, and background information. 3, 409-478.
(1996). Preface.
(Carey, J.R., Moyle P. B., Rejmánek M., & Vermeij G., Ed.).Biological Conservation, Invasion biology. 78, 1 - 2.
(1996). Preface.
(Carey, J.R., Moyle P. B., Rejmánek M., & Vermeij G., Ed.).Biological Conservation, Invasion biology. 78, 1 - 2.
(1996). Re-establishment of the natural life histories of Eagle Lake rainbow trout, USA.
(Soorae, P. S., Ed.).Global Re-introduction Perspectives: 2013. Further case studies from around the globe. 21-25.
(2013). Research needs in fisheries.
Transactions of the 44th North American Wildlife and Natural Resources Conference. 176-187.
(1979). Resource partitioning in a non-coevolved assemblage of estuarine fishes.
(Caillet, G. M., & Simenstad C. A., Ed.).Proceedings of the Third Pacific Workshop on Fish Food Habit Studies. 178-184.
(1982). A Review.
(Moyle, P. B., Ed.).Distribution and Ecology of Stream Fishes of the Sacramento-San Joaquin Drainage System, California. Publications in Zoology . 115, 255-256.
(1982). A Review.
(Moyle, P. B., Ed.).Distribution and Ecology of Stream Fishes of the Sacramento-San Joaquin Drainage System, California. Publications in Zoology . 115, 255-256.
(1982).
(2011). The role of adaptive management in restoring chinook salmon to the Tuolumne River.
(Wang, S. S. Y., & Carstens T., Ed.).Environmental and Coastal Hydraulics: Protecting the Aquatic Habitat. 557-562.
(1997). Sixteen species accounts of California endemic fishes.
(Lee, D.S., Ed.).Atlas of North American Freshwater Fishes. 123, 164, 199, 200, 209, 345, 346, 347, 384, 385, 391, 582, 777, 803, 815, 819.
(1980). Some effects of impoundments on populations of stream fish.
(Moyle, P. B., & Koch D.L., Ed.).Symposium on Trout/Nongame Fish Relationships in Streams. 17, 31-40.
(1975). Some effects of impoundments on populations of stream fish.
(Moyle, P. B., & Koch D.L., Ed.).Symposium on Trout/Nongame Fish Relationships in Streams. 17, 31-40.
(1975).
(2009). Status and conservation of lampreys in California.
Biology, management, and conservation, of lampreys in North America. 72, 279-292.
(2010).
(2010). Status of aquatic habitat types.
Sierra Nevada Ecosystem Project: Final report to Congress Vol. II, assessments, commissioned reports, and background information. 2, 945-952.
(1996). Status of fish and fisheries.
Sierra Nevada ecosystem project: Final report to Congress Vol. II, assessments, commissioned reports, and background information. 2, 953-973.
(1996). True smelts.
(Leet, W. S., Dewees C. M., & Havern C. W., Ed.).California's Living Marine Resources and Their Utilization. 75-78.
(1992). True smelts.
(Leet, W. S., Dewees C. M., Klingbeil R., & Larson E. J., Ed.).California's Living Marine Resources: A Status Report. 472–479.
(2001). Use of a restored central California floodplain by larvae of native and alien fishes.
Early Life History of Fishes in the San Francisco Estuary and Watershed. 125-140.
(2004). Wetlands.
Ecosystems of California. p 669-692,
(2016). Where have all the fishes gone: interactive factors producing fish declines in the Sacramento-San Joaquin estuary.
(Hollibaugh, J. T., Ed.).San Francisco Bay: the Ecosystem. 519-542.
(1996). Writing review papers.
(Jennings, C. A., Lauer T. E., & Vondracek B., Ed.).Scientific Communication for Natural Resource Professionals. 155-162.
(2012).
(1992).
(2016).
(2010).
On developing prescriptions for freshwater flows to sustain desirable fishes in the Sacramento-San Joaquin Delta.
46.
Fish_Flows_for_the_Delta_15feb2010.pdf (772.13 KB)
(2010).
(2010).
(1991). 
The Ecology of the Sacramento-San Joaquin Delta: a Community Profile..
U.S. Fish and Wildlife Service Biological Report . 85(7.22), 106.
(1989).
(1995). Keys to the inland fishes of California.
34, 16pp.
(1982).
(2010).
(1996).
(1998).
(2004). Abundance, size, and diel feeding ecology of Blackfordia virginica (Mayer, 1910), a non-native hydrozoan in the lower Napa and Petaluma Rivers, California (USA).
Aquatic Invasions. 8(2), 147–156.
(2013). Adapting California's Ecosystems to a Changing Climate.
BioScience. 65(3), 247–262.
(2015).