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Moyle, P. B. (1981).  Review of E. K. Balon (Editor), Charrs, salmonid fishes of the Genus Salvelinus. Transactions of the American Fisheries Society . 110, 313-316.
Moyle, P. B. (1998).  Review of “Fisheries Conservation and Management” by M. R. Ross. Copeia .
Moyle, P. B. (2006).  Review of Freshwater Fishes of Mexico by Robert Rush Miller. (Miller, R. Rush, Ed.).Quarterly Review of Biology . 81,
Moyle, P. B. (1989).  Review of P. C. Trotter, Cutthroat: Native Trout of the West, and R. E. Greswell, Status and Management of Interior Stocks of Cutthroat Trout. Copeia . 811-812.
Moyle, P. B. (1991).  Review of R. Pethiyagoda, Freshwater Fishes of Sri Lanka. The Wildlife Heritage Trust of Sri Lanka, Colombo. . Copeia . 1991, 1166-1177.
Moyle, P. B. (1991).  Review of Robert J. Wooton, Ecology of Teleost Fishes. Chapman and Hall, New York.. Quarterly Review of Biology . 66, 404pp.
Moyle, P. B. (2004).  Review of Snakehead: fish out of water by Jay Dolan. CoCopeia . 710-711.
Moyle, P. B. (1984).  Review of W. N. Eschmeyer and E. S. Herald, A Field Guide to Pacific Coast Fishes of North America from the Gulf of Alaska to Baja California. The Quarterly Review of Biology. 59, p. 85.
Moyle, P. B. (1998).  Review of “Web of Water: Life in Redwood Creek” by M. Khosla. California Coast and Ocean . 14(1), 
E., G-B., & Moyle P. B. (2011).  Rivers. (D., S., & M. R., Ed.).Encyclopedia of invasive introduced species. 609-612.
Moyle, P. B., & Yoshiyama R. M. (1997).  The role of adaptive management in restoring chinook salmon to the Tuolumne River. (Wang, S. S. Y., & Carstens T., Ed.).Environmental and Coastal Hydraulics: Protecting the Aquatic Habitat. 557-562.
Thompson, L. C., Voss J. L., Larsen R. E., Tietje W. D., Cooper R. A., & Moyle P. B. (2008).  Role of hardwood in forming habitat for southern California steelhead. Proceedings of the sixth California oak symposium: today's challenges, tomorrow's opportunities. USDA Forest Service General Technical Report PSW-GTR-217. 307-319.
Herbold, B., Baltz D. M., Brown L. R., Grossinger R., Kimmerer W., Lehman P., et al. (2014).  The role of tidal marsh restoration in fish management in the San Francisco Estuary. San Francisco Estuary and Watershed Science. 12(1), 
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Moyle, P. B., Israel JA., & Purdy SE. (2008).  Salmon, steelhead, and trout in California: status of an emblematic fauna. 316.
Moyle, P. B., Israel J. A., & Purdy S. (2008).  Salmon, Steelhead and Trout in California: Status of an Emblematic Fauna.
Merz, J. E., & Moyle P. B. (2006).  Salmon, Wildlife, and Wine: Marine-Derived Nutrients in Human-Dominated Ecosystems of Central California. Ecological Applications. 16(3), 999-1009.
Durand, J. R., & Moyle P. B. (2015).  San Francisco Estuary: Time for a Reconciliation Approach to Species Conservation.
Moyle, P. B. (1993).  Saving California's salmon: The legacy of Ishi. Trout. Summer, 14-17.
Hanak, E., Phillips C., Lund J. R., Durand J. R., Mount JF., & Moyle P. B. (2013).  Scientist and Stakeholder Views on the Delta Ecosystem. 106.
Baltz, D. M., Vondracek B., Brown L. R., & Moyle P. B. (1991).  Seasonal Changes in Microhabitat Selection by Rainbow Trout in a Small Stream. Transactions of the American Fisheries Society. 120(2), 166-176.
Baltz, D. M., & Moyle P. B. (1984).  Segregation by species and size classes of rainbow trout, Salmo gairdneri, and Sacramento sucker, Catostomus occidentalis, in three California streams. Environmental Biology of Fishes. 10(1-2), 101-110.
Moyle, P. B. (2008).  Serpentine haiku. California Coast and Ocean. 24(2), 40.
Moyle, P. B. (1980).  Sixteen species accounts of California endemic fishes. (Lee, D.S., Ed.).Atlas of North American Freshwater Fishes. 123, 164, 199, 200, 209, 345, 346, 347, 384, 385, 391, 582, 777, 803, 815, 819.
Moyle, P. B. (1976).  Some effects of channelization on the fishes and invertebrates of Rush Creek, Modoc County, California. California Fish and Game. 62, 179–186.
Adans, J.R., & Moyle P. B. (1975).  Some effects of impoundments on populations of stream fish. (Moyle, P. B., & Koch D.L., Ed.).Symposium on Trout/Nongame Fish Relationships in Streams. 17, 31-40.
Adans, J.R., & Moyle P. B. (1975).  Some effects of impoundments on populations of stream fish. (Moyle, P. B., & Koch D.L., Ed.).Symposium on Trout/Nongame Fish Relationships in Streams. 17, 31-40.
Thompson, L. C., Voss J. L., Larsen R. E., Tietje W. D., Cooper R. A., & Moyle P. B. (2012).  Southern Steelhead, Hard Woody Debris, and Temperature in a California Central Coast Watershed. Transactions of the American Fisheries Society. 141(2), 275-284.
Marchetti, M. P., & Moyle P. B. (2000).  Spatial and Temporal Ecology of Native and Introduced Fish Larvae in Lower Putah Creek, California. Environmental Biology of Fishes. 58(1), 75-87.
Vondracek, B., Baltz D. M., Brown L. R., & Moyle P. B. (1989).  Spatial, seasonal and diel distribution of fishes in a California reservoir dominated by native fishes. Fisheries Research. 7(1-2), 31 - 53.
Moyle, P. B., Lusardi R. A., Samuel P., & Katz J. V. E. (2017).  State of the Salmonids: Status of California's Emblematic Fishes 2017. PDF icon State of the Salmonids 2017 (8.35 MB)
Moyle, P. B., Quiñones R. M., & Brown L. R. (2010).  Status and conservation of lampreys in California.
Moyle, P. B., Brown L. R., Chase S. D., & Quiñones R. M. (2009).  Status and conservation of lampreys in California.
Moyle, P. B., Brown L. R., & Quiñones R. M. (2010).  Status and conservation of lampreys in California. Biology, management, and conservation, of lampreys in North America. 72, 279-292.
Hetbold, B., Jassby A.D., & Moyle P. B. (1992).  Status and trends report on aquatic resources in the San Francisco Estuary. 257.
Moyle, P. B. (1996).  Status of aquatic habitat types. Sierra Nevada Ecosystem Project: Final report to Congress Vol. II, assessments, commissioned reports, and background information. 2, 945-952.
Brown, L. R., & Moyle P. B. (1994).  Status of coho salmon (Oncorhynchus kisutch) in California. North American Journal of Fisheries Management . 14, 237-261.
Moyle, P. B., Yoshiyama R. M., & Knapp R. A. (1996).  Status of fish and fisheries. Sierra Nevada ecosystem project: Final report to Congress Vol. II, assessments, commissioned reports, and background information. 2, 953-973.
Meng, L., & Moyle P. B. (1995).  Status of Splittail in the Sacramento-San Joaquin Estuary. Transactions of the American Fisheries Society. 124(4), 538-549.
Moyle, P. B. (1974).  Status of the Modoc sucker (Catostomus microps, Pisces: Catostomidae). Cal-Neva Wildlife. 1974, 35–38.
Moyle, P. B., & Baltz D. M. (1979).  Stillwaters west. Rod and Reel Magazine . Part I, September/October; Part II, November/December, Part I pp20-26; Part II pp22-27.
Grossman, G. D., Freeman M. C., Moyle P. B., & Whitaker, Jr. J. O. (1985).  Stochasticity and Assemblage Organization in an Indiana Stream Fish Assemblage. The American Naturalist. 126(2), 275-285.
Grossman, G. D., Moyle P. B., & Whitaker, Jr. J. O. (1982).  Stochasticity in Structural and Functional Characteristics of an Indiana Stream Fish Assemblage: A Test of Community Theory. The American Naturalist. 120(4), 423-454.
Healey, M., Kimmerer W., Kondolf GM., Meade R., Moyle P. B., & Twiss R. (1998).  Strategic plan for the Ecosystem Restoration Program. 252.
Lusardi, R. A., Jeffres C. A., & Moyle P. B. (2018).  Stream macrophytes increase invertebrate production and fish habitat utilization in a California stream. River Research and Applications. PDF icon Lusardietal2018.pdf (548.37 KB)
Hanak, E., Durand J. R., Fleenor W. E., Gray B. E., Medellín-Azuara J., Mount JF., et al. (2013).  Stress Relief: Prescriptions for a Healthier Delta Ecosystem. 32.PDF icon Main Report Delta Stressors (9.72 MB)
Moyle, P. B., Manfree A. D., & Fiedler P. L. (2014).  Suisun Marsh: Ecological History and Possible Futures. 256.
Moyle, P. B., Manfree A. D., & Fiedler P. L. (2014).  Suisun Marsh: Ecological History and Possible Futures. 256.
O'Rear, T., & Moyle P. B. (2017).  Suisun Marsh Fish Study: trends in fish and invertebrate populations of Suisun Marsh January 2015 - December 2015. PDF icon Suisun Marsh Fish Report 2015 Final - A.pdf (1.44 MB)PDF icon Suisun Marsh Fish Report 2015 Final - B.pdf (789.71 KB)
O'Rear, T., & Moyle P. B. (2015).  Suisun Marsh Fish Study: Trends in fish and invertebrate populations of Suisun Marsh January 2014 - December 2014. PDF icon Suisun Marsh Fish Report 2014 Final.pdf (1.97 MB)
O'Rear, T., & Moyle P. B. (2015).  Suisun Marsh Fish Study: Trends in fish and invertebrate populations of Suisun Marsh January 2013 - December 2013. PDF icon Suisun Marsh Fish Report 2013 Final No Appendix.pdf (1.67 MB)PDF icon Suisun Marsh Fish Report 2013 Appendix.pdf (68.56 KB)