Homogenization of California's Fish Fauna Through Abiotic Change. (Lockwood, J. L., & McKinney M. L., Ed.).Biotic Homogenization. 259-278.(2001).
Fish Invasions in California Watersheds: Testing Hypotheses Using Landscape Patterns. Ecological Applications. 14(5), 1507-1525.(2004).
Modeling the Hydrology of Climate Change in California's Sierra Nevada for Subwatershed Scale Adaptation. Journal of the American Water Resources Association. 45(6),(2009).
Why Climate Change Makes Riparian Restoration More Important than Ever: Recommendations for Practice and Research. Ecological Restoration. 27(3),(2009).
Ecology and Management of the Spring Snowmelt Recession. Bioscience. 60(2),(2010).
Groundwater Database for California, Poster. California Water and Environmental Modeling Forum.(2010).
Hydrologic Response and Watershed Sensitivity to Climate Warming in California’s Sierra Nevada. PLoS ONE. 5(4),(2010).
Environmental heterogeneity and community structure of the Kobuk River, Alaska, in response to climate change. Ecosphere. 2(4), 1-19.(2011).
Freshwater conservation options for a changing climate in California’s Sierra Nevada. Marine and Freshwater Research. 66, 266-278.(2011).
Hydropower Relicensing and Climate Change. Journal of the American Water Resources Association. 1-7.(2011).
Multiscale Patterns of Riparian Plant Diversity and Implications for Restoration. Restoration Ecology. 19,(2011).
Addressing Nitrate in California’s Drinking Water: Executive Summary. (Darby, J., Fogg G., Howitt R., Jessoe K., Pettygrove S. G., Quinn J. F., et al., Ed.).Addressing Nitrates in California's Drinking Water.(2012).
Addressing Nitrate in California’s Drinking Water: Technical Report 2 - Sources of Nitrate in Groundwater.(2012).
Addressing Nitrate in California’s Drinking Water with a Focus on Tulare Lake Basin and Salinas Valley Groundwater. Report for the State Water Resources Control Board Report to the Legislature. 80.(2012).
Hydropower Costs Of Environmental Flows And Climate Warming In California’s Upper Yuba River Watershed. River Research and Applicatiions.(2012).
Stream temperature sensitivity to climate warming in California’s Sierra Nevada: impacts to coldwater habitat. Climatic Change. 1-22.(2012).
Water and Energy Sector Vulnerability to Climate Warming in the Sierra Nevada: Water Year Classification in Non-Stationary Climates. Our Changing Climate.(2012).
In bad waters: Water year classification in nonstationary climates. Water Resources Research. 49(February 2013), 1137-1148.(2013).
A Method to Consider Whether Dams Mitigate Climate Change Effects on Stream Temperatures. Journal of the American Water Resources Association.(2013).
Montane Meadows in the Sierra Nevada: Changing Hydroclimatic Conditions and Concepts for Vulnerability Assessment. Center for Watershed Sciences Technical Report. 63.(2013).
100 years of California’s water rights system: patterns, trends and uncertainty. Environmental Research Letters. 9, 10pp.(2014).
COMBINED EFFECTS OF RESERVOIR OPERATIONS AND CLIMATE WARMING ON THE FLOW REGIME OF HYDROPOWER BYPASS REACHES OF CALIFORNIA'S SIERRA NEVADA. River Research and Applications.(2014).
Economic Feasibility of Irrigated Agricultural Land Use Buffers to Reduce Groundwater Nitrate in Rural Drinking Water Sources. Water. 7(1),(2014).
Hydrolapse Videography: A Coupled Hydroinformatic Stack for Improved Visual Assessment of River Dynamics. Proceedings of the International Conference on Hydroinformatics.(2014).
A programmable information system for management and analysis of aquatic species range data in California. Environmental Modelling & Software. 53, 13 - 26.(2014).
Simulating High-Elevation Hydropower with Regional Climate Warming in the West Slope, Sierra Nevada. JOURNAL OF WATER RESOURCES PLANNING AND MANAGEMENT. 140, 714-723.(2014).
Systematic screening of dams for environmental flow assessment and implementation. BioScience. 65(6), 1006-1018.(2014).
Systematic Screening of Dams for Environmental Flow Assessment and Implementation. BioScience. 64(10), 1-13.(2014).
A Detailed Outline for Groundwater Sustainability Plans under California's Sustainable Groundwater Management Act.(2015).
Functional Flows in Modified Riverscapes: Hydrographs, Habitats and Opportunities. BioScience. 65(9),(2015).
Patterns of Freshwater Species Richness, Endemism, and Vulnerability in California. PLoS ONE. 10(7),(2015).
Flood regime typology for floodplain ecosystem management as applied to the unregulated Cosumnes River of California, United States. Ecohydrology. 10(e1817),(2017).
A Freshwater Conservation Blueprint for California: Prioritizing Watersheds for Freshwater Biodiversity. Freshwater Science. 37(2),(2018).